La Trobe Agricultural RNA-seq Database

La Trobe Agricultural RNA-seq Database contains a collection of RNA-seq experiments from researchers at La Trobe as well as national and international researchers.

Organisms

• Arabidopsis (A. thaliana) [4 data-sets]
• Barley (Hordeum vulgare) [2 data-sets]
• Maize (Zea mays) [1 data-set]
• Rice (Oryza sativa) [1 data-set]
• Tomato (Solanum lycopersicum) [1 data-set]
• Wheat (Triticum aestivum L.) [1 data-set]

External links

• For software downloads, complete installation / administration instructions and help files please visit our software repository.
• GeneExplore (Degust) is powered by Degust and allows you to find genes of interest based on their expression profile.
• GeneView (eFP) is powered by eFP Browser and allows you to view the expression of a single gene or transcript.
• Galaxy RNA-seq tutorial: useful for preparing your data for use with AgriSeqDB.